GECO Evolutionary and Computational Genomics
Publications
Display of 1 to 30 publications on 1266 in total
Computing Thermodynamically Consistent Elementary Flux Modes with Answer Set Programming
CMSB 2024 - 22nd International Conference Computational Methods in Systems Biology . LNCS-14971 : 80-88
Conference paper
see the publicationA genome-wide study of ruminants reveals two endogenous retrovirus families still active in goats
Preprint
see the publicationSMBE Secretary’s Report
Molecular Biology and Evolution . 41 ( 6 )
Journal article
see the publicationLook4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats
Mobile DNA . 15 ( 1 ) : 8
Journal article
see the publicationDiversité et diversification des Pectobacteriaceae, une famille de bactéries phytopathogènes d’importance mondiale
Cahiers Scientifiques de la Fondation Pierre Vérots . ( 10 ) : 19-29
Journal article
see the publicationISMB/ECCB 2023 organization benefited from the strengths of the French bioinformatics community
Bioinformatics Advances . 4 ( 1 ) : vbae040
Journal article
see the publicationBradyrhizobium hardenbergiae sp. nov., isolated from Hardenbergia violacea in Australia, represents a novel basal lineage of the B. elkanii supergroup
Preprint
see the publicationA Wright–Fisher graph model and the impact of directional selection on genetic variation
Theoretical Population Biology . 159 : 13-24
Journal article
see the publicationInvestigating demic versus cultural diffusion and sex bias in the spread of Austronesian languages in Vietnam
PLoS ONE . 19 ( 6 ) : e0304964
Journal article
see the publicationComplete mitochondrial genomes of patients from Thailand with cardiovascular diseases
PLoS ONE . 19 ( 7 ) : e0307036
Journal article
see the publicationGTDrift: a resource for exploring the interplay between genetic drift, genomic and transcriptomic characteristics in eukaryotes
NAR Genomics and Bioinformatics . 6 ( 2 ) : lqae064
Journal article
see the publicationLogic programming-based Minimal Cut Sets reveal consortium-level therapeutic targets for chronic wound infections
npj Systems Biology and Applications . 10 ( 1 ) : 34
Journal article
see the publicationRegulatory and evolutionary impact of DNA methylation in two songbird species and their naturally occurring F1 hybrids
BMC Biology . 22 ( 1 ) : 124
Journal article
see the publicationHigh prevalence of PRDM9-independent recombination hotspots in placental mammals
Proceedings of the National Academy of Sciences of the United States of America . 121 ( 23 ) : e2401973121
Journal article
see the publicationLncRNA analyses reveal increased levels of non-coding centromeric transcripts in hepatocellular carcinoma
Preprint
see the publicationPersistent homology reveals strong phylogenetic signal in 3D protein structures
PNAS Nexus . 3 ( 4 ) : 158
Journal article
see the publicationThe genetic legacy of the expansion of Bantu-speaking peoples in Africa
Nature . 625 ( 7995 ) : 540–547
Journal article
see the publicationPRDM9 drives the location and rapid evolution of recombination hotspots in salmonids
Preprint
see the publicationThe role of recombination dynamics in shaping signatures of direct and indirect selection across the Ficedula flycatcher genome †
Proceedings of the Royal Society B: Biological Sciences . 291 ( 2015 )
Journal article
see the publicationEvidence that genetic drift not adaptation drives fast‐Z and large‐Z effects in Ficedula flycatchers
Molecular Ecology .
DOI: 10.1111/mec.17262
Journal article
see the publicationDescription of a new genus of the Pectobacteriaceae family isolated from water in coastal brackish wetlands of the French Camargue region, Prodigiosinella gen. nov., including the new species Prodigiosinella aquatilis sp. nov
Systematic and Applied Microbiology . 47 ( 2-3 ) : 126497
Journal article
see the publicationMicroAnnot: A Dedicated Workflow for Accurate Microsporidian Genome Annotation
International Journal of Molecular Sciences . 25 ( 2 ) : 880
DOI: 10.3390/ijms25020880
Journal article
see the publicationIdentification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues
Peer Community Journal . 4 ( e89 )
Journal article
see the publicationRandom genetic drift sets an upper limit on mRNA splicing accuracy in metazoans
eLife . 13 : RP93629
Journal article
see the publicationDe novo analysis of splicing from RNA-seq data: models, algorithms and applications
Mitigation of the diagenesis risk in biological apatite δ18O interpretation
Palaeogeography, Palaeoclimatology, Palaeoecology . 630 : 111812
Journal article
see the publicationδ2H and δ18O of river water from a high-altitude humid plain of the southern Alps: Implications for the interpretation of the isotopic compositions of bioapatite from humans living close to mountain areas
Journal of Archaeological Science: Reports . 49 : 104020
Journal article
see the publicationGenomic portrait and relatedness patterns of the Iron Age Log Coffin culture in northwestern Thailand
Nature Communications . 14 ( 1 ) : 8527
Journal article
see the publicationGenome-wide variation in the Angolan Namib Desert reveals unique pre-Bantu ancestry
Science Advances . 9 ( 38 )
Journal article
see the publication