Quantitative and Evolutionary Ecology of Communities Group
Thioulouse Jean
Directeur de recherche
CNRS
Mendel Building, 1st floor. Office 11.048
Bibliography Web page: You can visit my bibliography web page here: https://jthome.thioulouse.fr/ref/
Reproducible research : A series of paper with graphs and computations reproducibility:
https://jthome.thioulouse.fr/Reproducible_Research/
https://pbil.univ-lyon1.fr/members/thioulouse/RRBibJT/
Google Scholar: https://scholar.google.com/citations?hl=fr&user=1sjOJvSAAAAJO
ORCID ID: https://orcid.org/0000-0001-7664-05980
IdHAL: https://cv.archives-ouvertes.fr/jean-thioulouse
ade4 book: Multivariate Analysis of Ecological Data with ade4
https://link.springer.com/book/10.1007/978-1-4939-8850-1
Evol. Biol. 2021 paper reproducibility:
Overcoming the Spurious Groups Problem in Between-Group PCA
Research activity
My research activities are centred around innovation in the field of statistical methods in Biology. During the last years, I was mainly interested in statistical analysis methods used for studying bacterial diversity. I have also pursued methodological developments in software, leading to the distribution of several packages for R, and in consulting and teaching in several areas.
The ade4 package for R :ade4
The adegraphics package for R :adegraphics
The ade4TkGUI package for R :ade4TkGUI
Publications
Display of 121 to 150 publications on 153 in total
Heterogeneous Cell Density and Genetic Structure of Bacterial Pools Associated with Various Soil Microenvironments as Determined by Enumeration and DNA Fingerprinting Approach (RISA)
Microbial ecology . 39 : 263-272
Journal article
see the publicationDiversity of the bacterial hyperparasite Pasteuria penetrans in relation to the control of root-knot nematodes (Meloidogyne spp.) on Acacia holosericea
Nematology . 2 : 435-442
Journal article
see the publicationApproche qualitative et quantitative de l'effet de la jachère sur des populations de champignons mycorhiziens à arbuscules
Le sol, milieu vivant : fonctionnement et gestion .
Conference paper
see the publicationSusceptibility of several sahelian Acacia to Meloidogyne javanica (Treub) Chitw
Agroforestry Systems . 46 : 123-130
Journal article
see the publicationIdentification of soil factors that relate to the structure of the plant parasitic nematode community
Applied Soil Ecology . 8 : 35-49
Journal article
see the publicationEcology of larval mosquitoes with special reference to Anopheles arabiensis (Diptera: Culcidae) in market-garden wells in urban Dakar Senegal
Journal of Medical Entomology . 35 : 948-955
Journal article
see the publicationADE-4 Software: a tool for multivariate analysis and graphical display
Océanis : Série de documents océanographiques . 24 ( 4 ) : 393-416
Book chapter
see the publicationFunctional data analysis of curve asymmetry with application to the color pattern of Hydropsyche contubernalis head capsule
Biometrics . 53 : 294-305
Journal article
see the publicationADE-4: a multivariate analysis and graphical display software
Statistics and Computing . 7 : 75-83
Journal article
see the publicationNetMul a World-Wide Web user interface for multivariate analysis sofware
Computational Statistics and Data Analysis . 21 : 369-372
Journal article
see the publicationOn-line tools for sequence retrieval and multivariate statistics in molecular biology
Computer Applications in the Biosciences . 12 : 63-69
Journal article
see the publicationCorrespondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences
Computer Applications in the Biosciences . 12 : 519-524
Journal article
see the publicationTowards Better Graphics for Multivariate Analysis: the Interactive Factor Map
Computational Statistics and Data Analysis . 11 : 11-21
Journal article
see the publicationDE software: multivariate analysis and graphical display of environmental data
incollection . -- : 57-62
Journal article
see the publicationMultivariate analysis of spatial patterns: a unified approach to local and global structures
Environmental and Ecological Statistics . 2 : 1-14
Journal article
see the publicationCo-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package
Bioinformatics . 11 : 321-329
Journal article
see the publicationEvaluation of the Precision of Systematic Sampling : Nugget Effect and Covariogram Modelling
Journal of Microscopy . 172 : 249-256
Journal article
see the publicationChemometrical evaluation of multispecies-multichemical data by means of graphical techniques combined with multivariate analyses
Ecotoxicology and Environmental Safety . 26 : 333-345
Journal article
see the publicationEvaluation of the precision of systematic sampling nugget effect and covariogram modelling
Journal of Microscopy . 172 ( 3 ) : 249-256
Journal article
see the publicationA method for reciprocal scaling of species tolerance and sample diversity
Ecology . 73 : 670-680
Journal article
see the publicationMultivariate Analysis of the Input and Output Data in the Fugacity Model Level I
incollection . -- : 281-345
Journal article
see the publicationGraphical Techniques for Multidimensional Data Analysis
incollection . -- : 153-205
Journal article
see the publicationAUTO-MODELISATION EN ANALYSE DES DONNEES
La Modélisation - Confluent des sciences . : 71-86
Book chapter
see the publicationMacMul and GraphMu: two Macintosh programs for the display and analysis of multivariate data
Computers & Geosciences . 16 ( 8 ) : 1235-1240
Journal article
see the publicationStatistical analysis and graphical display of multivariate data on the Macintosh
Computer Applications in the Biosciences . 5 : 287-292
Journal article
see the publicationTraitements nématicides et peuplement de nématodes parasites de la canne à sucre au Burkina Faso. 1. Repousses
Revue de Nématologie . 12 ( 1 ) : 35-44
Journal article
see the publicationSpace-Time Structure in a Winter Rape Pest Population Psylliodes chrysocephala (Col. chrysomelidae): methodological proposals and biological interpretations
Journal of Applied Ecology . 24 : 435-450
Journal article
see the publicationLes analyses multitableaux en ecologie factorielle.
Acta Oecologica, Oecologia Generalis . 8 ( 4 ) : 463-480
Journal article
see the publicationLES POPULATIONS NATURELLES D'INSECTES: EXISTENCE DE STRUCTURES SPATIALES ET TEMPORELLES, LEUR ROLE DANS LA BIOLOGIE DES POPULATIONS
Coll. Nat. CNRS "Biologie des Populations" . : 90-97
Conference paper
see the publicationSTATISTICS TO FIND SPATIAL AND TEMPORAL STRUCTURES IN POPULATIONS
Pest Control: Operations and Systems Analysis in Fruit Fly Management. . : 263-282
Book chapter
see the publication