Evolutionary Genetics of Interactions Group

Members

Living systems are made up of a multitude of interlocking levels of organization, involving cooperation and conflict. Cooperation and the selection of systems operating in a coordinated manner has allowed so-called "major" evolutionary transitions, towards new scales of individuality, such as the eukaryotic cell. Nevertheless, natural selection continues to operate at all scales, generating possible evolutionary conflicts between the different components of the individual.

Our research is in line with this perspective, and aims to better understand the nature and evolutionary implications of the interactions between the multiple components of organisms, from genes to symbiotic bacteria, viruses and transposable elements. We also explore the impact of these interactions on the dynamics of genetic information, through horizontal transfer, or on genetic innovation and adaptation, through domestication. Our research, mainly experimental, but also theoretical, is implemented on arthropod models, and is mainly related to genetics and evolutionary genomics.

The team is structured along two main axis:

  •     Intragenomic interactions: transposable elements (resp. Marie Fablet)

        Ex1: The evolutionary dynamics of transposable elements (TEs) in genomes, in relation to their natural variability.      Our models include natural populations of Drosophila melanogaster and D. simulans, as well as species of agronomic or societal interest, such as the invasive species D. suzukii or the tiger mosquito Aedes albopictus.
        Ex2: Interactions between ET control and anti-viral immunity. We are studying the molecular mechanisms of RNA interference at the origin of the entanglement of these two processes, as well as the co-evolutionary implications, using experimental infections of different viruses on several Drosophila lines.
        People involved : CV, MB, MF

  •     Symbiosis, the driving force of evolution (resp. Natacha Kremer)

        Ex1 : Certain symbiotic bacteria provide metabolic capacities that the insect lacks. We are analysing these interactions in haematophagous insects (bedbugs, ticks) and phytophagous insects (the whitefly Bemisia tabaci) using approaches combining phenotype analysis, genetics, physiology and metabolomics.
        Ex2: Parasitoid insects have domesticated viral genes enabling them to bypass the immune responses of their hosts. We are studying the frequency and adaptive significance of these events and, more generally, looking into the factors structuring horizontal transfers in host-parasitoid communities.
        People involved: NK, LM, LZ, JMD, JV, FV, SC

 

Publications

Display of 61 to 90 publications on 445 in total

High Stability of the Epigenome in Drosophila Interspecific Hybrids

Alejandra Bodelón, Marie Fablet, Philippe Veber, Cristina Vieira, Maria Pilar García Guerreiro

Genome Biology and Evolution . 14 ( 2 )

DOI: 10.1093/gbe/evac024

Journal article

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Sex‐related differences in aging rate are associated with sex chromosome system in amphibians

Hugo Cayuela, Jean-François Lemaître Lemaître, Jean‐paul Léna, Victor Ronget, Iñigo Martínez‐solano, Erin Muths...

Evolution - International Journal of Organic Evolution . 76 ( 2 ) : 346-356

DOI: 10.1111/evo.14410

Journal article

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Transposable element dynamics in the host-bacteria association of the cereal weevil Sitophilus oryzae

Mariana G. Ferrarini, Clément Goubert, Nicolas Parisot, Carlos Vargas-Chávez, Agnès Vallier, Rosario Gil...

Mobile DNA 2021 .

Poster

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Author Correction: Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization

Jérémy Gauthier, Hélène Boulain, Joke J F A van Vugt, Lyam Baudry, Emma Persyn, Jean-Marc Aury...

Communications Biology . 4

DOI: 10.1038/s42003-021-02480-9

Journal article

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The discovery, distribution and diversity of DNA viruses associated with Drosophila melanogaster in Europe

Megan Wallace, Kelsey Coffman, Clément Gilbert, Sanjana Ravindran, Gregory Albery, Jessica Abbott...

Virus Evolution . 7 ( 1 ) : veab031

DOI: 10.1093/ve/veab031

Journal article

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The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions

Vincent Mérel, Patricia Gibert, Inessa Buch, Valentina Rodriguez Rada, Arnaud Estoup, Mathieu Gautier...

Molecular Biology and Evolution . 38 ( 10 ) : 4252-4267

DOI: 10.1093/molbev/msab155

Journal article

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Infections by Transovarially Transmitted DMelSV in Drosophila Have No Impact on Ovarian Transposable Element Transcripts but Increase Their Amounts in the Soma

Marlène Roy, Barbara Viginier, Camille A Mayeux, Maxime Ratinier, Marie Fablet

Genome Biology and Evolution . 13 ( 9 )

DOI: 10.1093/gbe/evab207

Journal article

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Phenotypic and Transcriptomic Responses to Stress Differ According to Population Geography in an Invasive Species

Pierre Marin, Angelo Jaquet, Justine Picarle, Marie Fablet, Vincent Merel, Marie Laure Delignette-Muller...

Genome Biology and Evolution . 13 ( 9 ) : evab208

DOI: 10.1093/gbe/evab208

Journal article

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Natural Selection beyond Life? A Workshop Report

Sylvain Charlat, André Ariew, Pierrick Bourrat, María Ferreira Ruiz, Thomas Heams, Philippe Huneman...

Life . 11 ( 10 ) : 1051

DOI: 10.3390/life11101051

Journal article

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Transposable Element Expression and Regulation Profile in Gonads of Interspecific Hybrids of Drosophila arizonae and Drosophila mojavensis wrigleyi

Cecília Artico Banho, Daniel Siqueira Oliveira, Annabelle Haudry, Marie Fablet, Cristina Vieira, Claudia Marcia Aparecida Carareto

Cells . 10 ( 12 ) : 3574

DOI: 10.3390/cells10123574

Journal article

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DROP: Molecular voucher database for identification of Drosophila parasitoids

Chia-Hua Lue, Matthew L Buffington, Sonja Scheffer, Matthew Lewis, Tyler A Elliott, Amelia R I Lindsey...

Molecular Ecology Resources .

DOI: 10.1111/1755-0998.13435

Journal article

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Cytotype Affects the Capability of the Whitefly Bemisia tabaci MED Species To Feed and Oviposit on an Unfavorable Host Plant

Sylvain Benhamou, Isabelle Rahioui, Hélène Henri, Hubert Charles, Pedro da Silva, Abdelaziz Heddi...

mBio . 12 ( 6 ) : 1-16

DOI: 10.1128/mBio.00730-21

Journal article

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Wolbachia load variation in Drosophila is more likely caused by drift than by host genetic factors

Alexis Bénard, Hélène Henri, Camille Noûs, Fabrice Vavre, Natacha Kremer

Peer Community In Evolutionary Biology .

DOI: 10.1101/2020.11.29.402545

Journal article

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CPCN - BILAN DE MANDATURE 2016 – 2021

Olivier Coutard, Pierre-Olivier Amblard, Claude Amra, Brigitte Bacroix, Pascal Barone, Yannick Barthe...

Preprint

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Role of symbionts in insects’ ecological diversification: cytotype influences exploitation of an unfavorable host plant in the sap-feeder Bemisia tabaci

Sylvain Benhamou, Isabelle Rahioui, Hélène Henri, Hubert Charles, Pedro da Silva, Abdelaziz Heddi...

DECRYPthèse E2M2 Edition 20 .

Conference paper

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Role of symbionts in insects’ ecological diversification: cytotype influences exploitation of an unfavorable host plant in the whitefly Bemisia tabaci (Hemiptera: Aleyrodidae)

Sylvain Benhamou, Isabelle Rahioui, Hélène Henri, Hubert Charles, Pedro da Silva, Abdelaziz Heddi...

G-RREMI 2021 - Groupe Régional de Recherche en Microbiologie des Interactions .

Conference paper

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The transposable element-rich genome of the cereal pest Sitophilus oryzae

Nicolas Parisot, Carlos Vargas-Chávez, Clément Goubert, Patrice Baa-Puyoulet, Séverine Balmand, Louis Beranger...

BMC Biology . 19 ( 1 ) : 241

DOI: 10.1186/s12915-021-01158-2

Journal article

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Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization

Jérémy Gauthier, Hélène Boulain, Joke J F A van Vugt, Lyam Baudry, Emma Persyn, Jean-Marc Aury...

Communications Biology . 4 ( 1 ) : 1-15

DOI: 10.1038/s42003-020-01623-8

Journal article

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In vivo MRI characterization of the Xlf-/- mouse model of genetic radiosensitivity following low-dose in utero irradiation

Laurence Mouton, O. Etienne, J. Feat-Vetel, D. Barrière, E.A. Pérès, J-P de Villartay...

European Society for Magnetic Resonance in Medicine and Biology (ESMRMB Congress 2020) .

Conference paper

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La tête de « Jupiter capitolin » de Fréjus (Forum Iulii)

Yvon Lemoine, Florian Blanchard

Revue archéologique de Narbonnaise . ( 53 ) : 239-266

Journal article

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Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA Viruses

Martin Kapun, Maite G Barrón, Fabian Staubach, Darren J Obbard, R Axel W Wiberg, Jorge Vieira...

Molecular Biology and Evolution . 37 ( 9 ) : 2661-2678

DOI: 10.1093/molbev/msaa120

Journal article

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Superparasitism by a parasitoid wasp: The absence of sublethal effects from the neonicotinoid insecticide imidacloprid enlightens the specificity of the cholinergic pathway involved

Jean-Marie Delpuech

Ecotoxicology and Environmental Safety . 201 : 110809

DOI: 10.1016/j.ecoenv.2020.110809

Journal article

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Endosymbiont diversity in natural populations of Tetranychus mites is rapidly lost under laboratory conditions

Flore Zélé, Inês Santos, Margarida Matos, Mylène Weill, Fabrice Vavre, Sara Magalhaes

Heredity . 124 ( 4 ) : 603-617

DOI: 10.1038/s41437-020-0297-9

Journal article

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Combining sterile and incompatible insect techniques for the population suppression of Drosophila suzukii

K. Nikolouli, F. Sassù, L. Mouton, C. Stauffer, K. Bourtzis

Journal of Pest Science . 93 ( 2 ) : 647 - 661

DOI: 10.1007/s10340-020-01199-6

Journal article

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How consistent is RAD‐seq divergence with DNA‐barcode based clustering in insects?

Marie Cariou, Hélène Henri, Sonia Martinez, Laurent Duret, Sylvain Charlat

Molecular Ecology Resources . 20 ( 5 ) : 1294-1298

DOI: 10.1111/1755-0998.13178

Journal article

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Homology-Free Detection of Transposable Elements Unveils Their Dynamics in Three Ecologically Distinct Rhodnius Species

Marcelo Castro, Clément Goubert, Fernando Monteiro, Cristina Vieira, Claudia Carareto

Genes . 11 ( 2 ) : 170

DOI: 10.3390/genes11020170

Journal article

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A behavior-manipulating virus relative as a source of adaptive genes for Drosophila parasitoids

D Di Giovanni, D. Lepetit, B Guinet, B Bennetot, M. Boulesteix, Yohann Couté...

Molecular Biology and Evolution . 37 ( 10 ) : 2791-2807

DOI: 10.1093/molbev/msaa030

Journal article

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Experimental evolution of virulence and associated traits in a Drosophila melanogaster - Wolbachia symbiosis

David Monnin, Natacha Kremer, Caroline Michaud, Manon Villa, Hélène Henri, Emmanuel Desouhant...

Peer Community In Evolutionary Biology . : e9

DOI: 10.24072/pcjournal.9

Journal article

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