GECO Génomique Computationnelle et Evolutive

Influence of atmospheric conditions during incubation on the susceptibilities of Streptococcus pneumoniae isolates to five beta- lactam antibiotics

M. Chomarat, L. Chollet, M. Peyret, Jean-Pierre Flandrois

Journal of Antimicrobial Chemotherapy . 40 ( 4 ) : 599-601

DOI: 10.1093/jac/40.4.599

1997

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Simple relationship between acid dissociation constant and minimal pH for microbial growth in laboratory medium

Jean-Pierre Flandrois, L. Rosso, E. Zuber, C. Pichat

International Journal of Food Microbiology . 35 ( 1 ) : 75-81

DOI: 10.1016/S0168-1605(96)01231-7

1997

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Evolutionary affinities of the order Perissodactyla and the phylogenetic status of the superordinal taxa Ungulata and Altungulata

D. Graur, Manolo Gouy, L. Duret

Molecular Phylogenetics and Evolution . 7 ( 2 ) : 195-200

DOI: 10.1006/mpev.1996.0391

1997

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Cloning of the mouse BTG3 gene and definition of a new gene family (the BTG family) involved in the negative control of the cell cycle

F Guéhenneux, L. Duret, Mb Callanan, R Bouhas, S Hayette, C Berthet...

Leukemia . 11 ( 3 ) : 370-375

DOI: 10.1038/sj.leu.2400599

1997

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Cloning and characterization of a gene encoding a novel immunodominant antigen of Trypanosoma cruzi

M. Lesenechal, L. Duret, M.I. Cano, R.A. Mortara, M. Jolivet, M.E. Camargo...

Molecular and Biochemical Parasitology . 87 : 193-204

1997

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Flexible Identification of Structural Objects in Nucleic Acid Sequences: Palindromes Mirror Repeats Pseudoknots and Triple Helices

M.-F. Sagot, Alain Viari

Annual Symposium on Combinatorial Pattern Matching (CPM) . 1264 : 224-246

DOI: 10.1007/3-540-63220-4_62

1997

Acte de congrès

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Multiple sequence comparison - A peptide matching approach

Marie-France Sagot, Alain Viari, H Soldano

Theoretical Computer Science . 180 ( 1-2 ) : 115--137

DOI: 10.1016/S0304-3975(96)00137-5

1997

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Evolutionary distances between nucleotide sequences based on the distribution of substitution rates among sites as estimated by parsimony

N.J. Tourasse, Manolo Gouy

Molecular Biology and Evolution . 14 ( 3 ) : 287-298

DOI: 10.1093/oxfordjournals.molbev.a025764

1997

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Reappraisal of the effect of temperature on the growth kinetics of Aeromonas salmonicida

V. Guérin-Faublée, Sandrine Charles, M. Chomarat, Jean-Pierre Flandrois

Letters in Applied Microbiology . 25 : 363-366

1997

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A model describing the relationship between lag time and mild temperature increase duration

S. Breand, G. Fardel, Jean-Pierre Flandrois, L. Rosso, R. Tomassone

International Journal of Food Microbiology . 38 : 157-167

1997

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Homogeneous Two-Site Immunometric Assay Kinetics as a Theoretical Tool for Data Analysis

Emmanuel Zuber, Gérard Mathis, Jean-Pierre Flandrois

Analytical Biochemistry . 251 ( 1 ) : 79-88

DOI: 10.1006/abio.1997.2243

1997

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A Descriptive Model for the Kinetics of a Homogeneous Fluorometric Immunoassay

Emmanuel Zuber, Laurent Rosso, Bruno Darbouret, Françoise Socquet, Gérard Mathis, Jean-Pierre Flandrois

Journal of Immunoassay and Immunochemistry . 18 ( 1 ) : 21-47

DOI: 10.1080/01971529708005803

1997

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Phylogenetic position of the order Lagomorpha (rabbits hares and allies)

D. Graur, L. Duret, Manolo Gouy

Nature . 379 : 333-335

DOI: 10.1038/379333a0

1996

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A Double Combinatorial Approach to Discovering Patterns in Biological Sequences

M.-F. Sagot, Alain Viari

incollection . 1075 : 186-208

1996

Article dans une revue

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WWW-query: an on-line retrieval system for biological sequence banks

G. Perrière, Manolo Gouy

Biochimie . 78 ( 5 ) : 364-369

DOI: 10.1016/0300-9084(96)84768-7

1996

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On-line tools for sequence retrieval and multivariate statistics in molecular biology

G. Perrière, J. Thioulouse

Computer Applications in the Biosciences . 12 : 63-69

1996

Article dans une revue

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SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

N. Galtier, Manolo Gouy, Christian Gautier

Bioinformatics . 12 ( 6 ) : 543-548

DOI: 10.1093/bioinformatics/12.6.543

1996

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Application of a modified disc diffusion technique to antimicrobial susceptibility testing of Vibrio anguillarum and Aeromonas salmonicida clinical isolates

V. Guerin-Faublée, Marie Laure Delignette-Muller, M. Vigneulle, Jean-Pierre Flandrois

Veterinary Microbiology . 51 : 137-149

1996

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Differential growth of Listeria monocytogenes at 4 and 8°C: Consequences for the Shelf Life of Chilled Products

L. Rosso, S. Bajard, Jean-Pierre Flandrois, C. Lahellec, J. Fournaud, P. Veit

Journal of Food Protection . 59 ( 9 ) : 944-949

DOI: 10.4315/0362-028X-59.9.944

1996

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Evaluation of an expert system linked to a rapid antibiotic susceptibility testing system for the detection of β-lactam resistance phenotypes

Jean-Pierre Flandrois, G. Vedel, M. Peyret, J.P. Gayral, Patrick Millot

Research in Microbiology . 147 ( 4 ) : 297-309

DOI: 10.1016/0923-2508(96)81390-8

1996

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The particular behaviour of Listeria monocytogenes under sub-optimal conditions

S. Bajard, L. Rosso, G. Fardel, Jean-Pierre Flandrois

International Journal of Food Microbiology . 29 : 201-211

1996

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Use of mathematics and statistics in nutrition modelling

G Ciuperca, R Tomassone, Jp Flandrois

Annales de zootechnie . 45 ( Suppl1 ) : 143-152

1996

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Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

G. Perrière, J.R. Lobry, J. Thioulouse

Computer Applications in the Biosciences . 12 : 519-524

1996

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LALNVIEW: a graphical viewer for pairwise sequence alignments

L. Duret, E. Gasteiger, G. Perrière

Computer Applications in the Biosciences . 12 : 507-510

1996

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NRSub: a non-redundant database for Bacillus subtilis

G. Perrière, I. Moszer, T. Gojobori

Nucleic Acids Research . 24 : 41-45

1996

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Early origin of foraminifera suggested by SSU rRNA gene sequences

J. Pawlowski, I. Bolivar, J.F. Fahrni, T. Cavalier-Smith, Manolo Gouy

Molecular Biology and Evolution . 13 ( 3 ) : 445-450

DOI: 10.1093/oxfordjournals.molbev.a025605

1996

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Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

Valérie Cilia, Bénédicte Lafay, Richard Christen

Molecular Biology and Evolution . 13 ( 3 ) : 451-61

1996

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An economic approach to the MIC.

M. Delignette-Muller, Jean-Pierre Flandrois, Catherine Chapuis

Zentralblatt fur Bakteriologie : international journal of medical microbiology . 284 ( 1 ) : 67-74

1996

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Isolation and characterization of a cDNA encoding a chicken actin-like protein

J.J. Michaille, Manolo Gouy, Simon Blanchet, L. Duret

Gene . 154 ( 2 ) : 205-209

DOI: 10.1016/0378-1119(94)00865-P

1995

Article dans une revue

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Searching for repeated words in a text allowing for mismatches and gaps

M-F. Sagot, V. Escalier, Alain Viari, H. Soldano

incollection . -- : 87-100

1995

Article dans une revue

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GECO Génomique Computationnelle et Evolutive

Equipe Bioinformatique, Phylogénie et Génomique Évolutive

Equipe Baobab

Publications

Influence of atmospheric conditions during incubation on the susceptibilities of Streptococcus pneumoniae isolates to five beta- lactam antibiotics

Simple relationship between acid dissociation constant and minimal pH for microbial growth in laboratory medium

Evolutionary affinities of the order Perissodactyla and the phylogenetic status of the superordinal taxa Ungulata and Altungulata

Cloning of the mouse BTG3 gene and definition of a new gene family (the BTG family) involved in the negative control of the cell cycle

Cloning and characterization of a gene encoding a novel immunodominant antigen of Trypanosoma cruzi

Flexible Identification of Structural Objects in Nucleic Acid Sequences: Palindromes Mirror Repeats Pseudoknots and Triple Helices

Multiple sequence comparison - A peptide matching approach

Evolutionary distances between nucleotide sequences based on the distribution of substitution rates among sites as estimated by parsimony

Reappraisal of the effect of temperature on the growth kinetics of Aeromonas salmonicida

A model describing the relationship between lag time and mild temperature increase duration

Homogeneous Two-Site Immunometric Assay Kinetics as a Theoretical Tool for Data Analysis

A Descriptive Model for the Kinetics of a Homogeneous Fluorometric Immunoassay

Phylogenetic position of the order Lagomorpha (rabbits hares and allies)

A Double Combinatorial Approach to Discovering Patterns in Biological Sequences

WWW-query: an on-line retrieval system for biological sequence banks

On-line tools for sequence retrieval and multivariate statistics in molecular biology

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

Application of a modified disc diffusion technique to antimicrobial susceptibility testing of Vibrio anguillarum and Aeromonas salmonicida clinical isolates

Differential growth of Listeria monocytogenes at 4 and 8°C: Consequences for the Shelf Life of Chilled Products

Evaluation of an expert system linked to a rapid antibiotic susceptibility testing system for the detection of β-lactam resistance phenotypes

The particular behaviour of Listeria monocytogenes under sub-optimal conditions

Use of mathematics and statistics in nutrition modelling

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequences

LALNVIEW: a graphical viewer for pairwise sequence alignments

NRSub: a non-redundant database for Bacillus subtilis

Early origin of foraminifera suggested by SSU rRNA gene sequences

Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

An economic approach to the MIC.

Isolation and characterization of a cDNA encoding a chicken actin-like protein

Searching for repeated words in a text allowing for mismatches and gaps