GECO Génomique Computationnelle et Evolutive
Equipe Bioinformatique, Phylogénie et Génomique Evolutive
Lafay Bénédicte
Chargée de recherche
CNRS
Je m’intéresse à l’évolution du génome procaryote en relation avec son architecture (réplicon, éléments mobiles), notamment dans les cas particuliers de l’émergence de la symbiose rhizobienne fixatrice d’azote de Parasponia, seul cas connu d’association à des non-légumineuse, et de la dissémination d’antibiorésistance.
I am interested in the evolution of the procaryote genome in relation to its architecture (replicons, mobile elements), with a special focus on the emergence of the nitrogen-fixing rhizobial symbiosis with non-legumous plants and on the dissemination of antibiotic resistances.
Publications
Affichage des publications 1 à 30 sur 62 au total
Bradyrhizobium hardenbergiae sp. nov., isolated from Hardenbergia violacea in Australia, represents a novel basal lineage of the B. elkanii supergroup
Pré-publication
voir la publicationBradyrhizobium commune sp. nov., isolated from nodules of a wide range of native legumes across the Australian continent
International Journal of Systematic and Evolutionary Microbiology . 73 ( 7 ) : 005971
Article dans une revue
voir la publicationComplete genome of Bradyrhizobium sp. strain BDV5419, representative of Australian genospecies L
Microbiology Resource Announcements . 10 ( 8 ) : e00042-21
DOI: 10.1128/MRA.00042-21
Article dans une revue
voir la publicationComplete Genome Sequence of Bradyrhizobium sp. Strain BDV5040, Representative of Widespread Genospecies B in Australia
Microbiology Resource Announcements . 10 ( 3 ) : e01326-20
DOI: 10.1128/MRA.01326-20
Article dans une revue
voir la publicationMetapopulation ecology links antibiotic resistance, consumption, and patient transfers in a network of hospital wards
eLife . 9
DOI: 10.7554/eLife.54795
Article dans une revue
voir la publicationMetapopulation ecology links antibiotic resistance, consumption and patient transfers in a network of hospital wards.
DOI: 10.1101/771790
Pré-publication
voir la publicationP2857 Quantifying drivers of antimicrobial resistance in a large network of hospital wards: a meta-population approach.
29TH ECCMID .
Acte de congrès
voir la publicationAil and PagC-Related Proteins in the Entomopathogenic Bacteria of Photorhabdus Genus
PLoS ONE . 9 ( 10 ) : e110060
Article dans une revue
voir la publicationContribution of graphs to the analysis of bacterial genome architecture
BioNetVisA workshop, ECCB'14, the 13th European Conference on Computational Biology .
Acte de congrès
voir la publicationChromosome formation in bacteria
EMBO Conference "Microbiology after the genomics revolution : Genomes 2014" .
Acte de congrès
voir la publicationTracing the origin of megaplasmids and secondary chromosomes in bacterial genomes
SBME . : A049 363
Acte de congrès
voir la publicationVisualization and analysis of an interconnected network of genomic elements
AdO'13: Apprentissage et données Omiques - Atelier de la conférence d'apprentissage Francophone CAp'13 - PFIA 2013 8ème Plate-Forme Intelligence Artificielle . : AdO-13_paper_6
Acte de congrès
voir la publicationUtilization of Machine-Learning Methodologies in Order to Understand Complex Evolutionary and Functional Links among Bacterial Genomes
IFCS2013 Book of abstracts . : p. 203
Acte de congrès
voir la publicationClassification of bacterial replicons based on the Genetic Information Transmission Systems
11th RECOMB - Comparative Genomics 2013 .
Acte de congrès
voir la publicationPrimate evolutionary history contribution to the deciphering of SIV/HIV origin and diversification
Evolution Ottawa - 1th Joint Congress on Evolutionary Biology .
Acte de congrès
voir la publicationModeling of 2-D DNA display.
Electrophoresis . 30 ( 21 ) : 3649-56
Article dans une revue
voir la publicationFull-Length Genome Characterization of a Novel Simian Immunodeficiency Virus Lineage (SIVolc) from Olive Colobus (Procolobus verus) and New SIVwrcPbb Strains from Western Red Colobus (Piliocolobus badius badius) from the Taï Forest in Ivory Coast
Journal of Virology . 83 ( 1 ) : 428-439
DOI: 10.1128/JVI.01725-08
Article dans une revue
voir la publicationExploring the FL-160-CRP gene family through sequence variability of the complement regulatory protein (CRP) expressed by the trypomastigote stage of Trypanosoma cruzi.
Infection, Genetics and Evolution . 8 ( 3 ) : 258-66
Article dans une revue
voir la publicationQuantitative predictions for DNA two-dimensional display according to size and nucleotide sequence composition
Electrophoresis . 29 ( 6 ) : 1264 - 1272
Article dans une revue
voir la publicationSequence variability and phylogenetic analyses of the Complement Regulatory Protein expressed by the trypomastigote stage of Trypanosoma cruzi identify a monophyletic group of CRP-like proteins
Xth European Multicolloquium of Parasitology .
Acte de congrès
voir la publicationFull molecular characterization of a simian immunodeficiency virus, SIVwrcpbt from Temminck's red colobus (Piliocolobus badius temminckii) from Abuko Nature Reserve, The Gambia
Virology . 376 ( 1 ) : 90-100
Article dans une revue
voir la publicationPrevalence and genetic diversity of simian immunodeficiency virus infection in wild-living red colobus monkeys (Piliocolobus badius badius) from the Taï forest, Côte d'Ivoire SIVwrc in wild-living western red colobus monkeys.
Infection, Genetics and Evolution . 8 ( 1 ) : 1-14
Article dans une revue
voir la publicationIdentification and molecular characterization of new STLV-1 and STLV-3 strains in wild-caught nonhuman primates in Cameroon
Virology . 371 ( 2 ) : 405-417
Article dans une revue
voir la publicationPrevalence and genetic diversity of simian immunodeficiency virus infection in wild red colobus Monkeys (Piliocolobus badius badius) from the Taï Forest, Côte d'Ivoire
2nd Congress of the European Federation of Primatology .
Acte de congrès
voir la publicationMolecular characterization of a simian immunodeficiency virus lineage (SIVwrc) from western red colobus (Piliocolobus badius badius)
14th International Workshop of HIV Dynamics & Evolution .
Acte de congrès
voir la publicationSimian immunodeficiency virus infection in wildliving red colobus monkey (Piliocolobus badius badius) from the Taï forest, Côte D'Ivoire
14th International Workshop of HIV Dynamics & Evolution .
Acte de congrès
voir la publicationMolecular diversity of legume root-nodule bacteria in Kakadu National Park, Northern Territory, Australia.
PLoS ONE . 2 ( 3 ) : e277
Article dans une revue
voir la publication