Publications
Display of 31 to 60 publications on 209 in total
How Long Does Wolbachia Remain on Board?
Molecular Biology and Evolution . 34 ( 5 ) : 1183 - 1193
Journal article
see the publicationMetabolic Investigation of the Mycoplasmas from the Swine Respiratory Tract
JOBIM 2016 .
Poster
see the publicationA Combinatorial Algorithm for Microbial Consortia Synthetic Design
Scientific Reports .
DOI: 10.1038/srep29182
Journal article
see the publicationRobustness of the Parsimonious Reconciliation Method in Cophylogeny
Lecture Notes in Computer Science . 9702 : 12
Journal article
see the publicationComputing and Listing st-Paths in Subway Networks
CSR 2016 - 11th International Computer Science Symposium in Russia . 9691 : 102-116
Conference paper
see the publicationIntroduction to the Special Theme - Tackling Big Data in the Life Sciences
Other publication
see the publicationInsights on the virulence of swine respiratory tract mycoplasmas through genome-scale metabolic modeling
BMC Genomics . 17 ( 1 ) : 353
Journal article
see the publicationSNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence
Nucleic Acids Research .
DOI: 10.1093/nar/gkw655
Journal article
see the publicationDegreeCox – a network-based regularization method for survival analysis
BMC Bioinformatics . 17 ( Suppl 16 ) : 109-121
Journal article
see the publicationEnumeration of minimal stoichiometric precursor sets in metabolic networks
Algorithms for Molecular Biology . 11 ( 1 ) : 25
Journal article
see the publicationMultiPus: Conception de communautés microbiennes pour la production de composés d'intérêt
Jobim .
Poster
see the publicationOn Maximal Chain Subgraphs and Covers of Bipartite Graphs
Combinatorial Algorithms - 27th International Workshop, IWOCA 2016 . 9843 : 137-150
Conference paper
see the publicationMycoplasma non-coding RNA: identification of small RNAs and targets
BMC Genomics . 23 : 1289 - 26
Journal article
see the publicationGenome reduction and potential metabolic complementation of the dual endosymbionts in the whitefly Bemisia tabaci
BMC Genomics . 16 : 226
Journal article
see the publicationTwo Host Clades, Two Bacterial Arsenals: Evolution through Gene Losses in Facultative Endosymbionts.
Genome Biology and Evolution . 7 ( 3 ) : 839-855
DOI: 10.1093/gbe/evv030
Journal article
see the publicationMeDuSa: A multi-draft based scaffolder.
Bioinformatics . : pii: btv171 [Epub ahead of print]
Journal article
see the publicationA polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs
Algorithms for Molecular Biology . : 10
Journal article
see the publicationMitochondrial respiration and genomic analysis provide insight into the influence of the symbiotic bacterium on host trypanosomatid oxygen consumption.
Parasitology . 142 ( 2 ) : 352-362
Journal article
see the publicationIncremental complexity of a bi-objective hypergraph transversal problem
Fundamentals of Computation Theory (FCT2015) . 9210 : 202-213
Conference paper
see the publicationEUCALYPT: efficient tree reconciliation enumerator
Algorithms for Molecular Biology . 10 ( 1 ) : 11
Journal article
see the publicationMirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing data
BMC Bioinformatics . 16 ( 1 ) : 179
Journal article
see the publicationCophylogeny Reconstruction via an Approximate Bayesian Computation
Systematic Biology . 64 ( 3 ) : 416-431
Journal article
see the publicationAmortized Õ(\textbarV)-Delay Algorithm for Listing Chordless Cycles in Undirected Graphs
Lecture Notes in Computer Science . 8737 : 418-429
Journal article
see the publicationAnnotating arthropods genome to study and compare their metabolism: the ArthropodaCyc collection of Cyc databases powered by CycADS
13. European Conference on Computational Biology (ECCB) . : 1 p.
Poster
see the publicationNavigating in a Sea of Repeats in RNA-seq without Drowning
WABI 2014 - 14th International Workshop on Algorithms in Bioinformatics . 8701 : 82-96
Conference paper
see the publicationRime: Repeat identification
Discrete Applied Mathematics . 163 ( 3 ) : 275–286
Journal article
see the publicationTelling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure
Bioinformatics . 30 ( 1 ) : 61-70
Journal article
see the publicationEfficiently listing bounded length st-paths
Twenty-Fifth International Workshop on Combinatorial Algorithms (IWOCA 2014) . : in press
Conference paper
see the publicationAmortized Õ(|V|) -Delay Algorithm for Listing Chordless Cycles in Undirected Graphs
22th Annual European Symposium on Algorithms . 8737 : 418-429
Conference paper
see the publicationA polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data
Workshop on Algorithms in Bioinformatics (WABI) .
Conference paper
see the publication