GECO Evolutionary and Computational Genomics

Bioinformatics, Phylogeny and Evolutionary Genomics Group

Marais Gabriel

Directeur de recherche

CNRS

Address: 43 bd du 11 novembre 1918
69622 VILLEURBANNE cedex

Email

Publications

Display of 31 to 60 publications on 88 in total

On the rarity of dioecy in flowering plants

Jos Käfer, Gabriel Marais, Jr. Pannell

Molecular Ecology . 26 : 1225-1241

DOI: 10.1111/mec.14020

Journal article

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The Evolution of Sex Chromosomes and Dosage Compensation in Plants

A. Muyle, R. Shearn, Gabriel Marais

Genome Biology and Evolution . 9 : 627-645

DOI: 10.1093/gbe/evw282

Journal article

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SEX-DETector: a probabilistic approach to study sex chromosomes in non-model organisms

A. Muyle, Jos Käfer, N. Zemp, S. Mousset, Franck Picard, Gabriel Marais

Genome Biology and Evolution . 8 : 2530-2543

DOI: 10.1093/gbe/evw172

Journal article

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Life Histories, Axes of Variation in

Aline Muyle, Gabriel Marais

The Encyclopedia of Evolutionary Biology . 2 : 480-492

Book chapter

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Evolution of sex-biased gene expression in a dioecious plant

N. Zemp, R. Tavares, A. Muyle, D. Charlesworth, Gabriel Marais, A. Widmer

Nature Plants . 2 : 16168

DOI: 10.1038/nplants.2016.168

Journal article

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Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia

Nicolas Blavet, Hana Blavet, Aline Muyle, Jos Käfer, Radim Cegan, Clothilde Deschamps...

BMC Genomics . 16 : 546

DOI: 10.1186/s12864-015-1698-7

Journal article

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An angiosperm-wide analysis of the gynodioecy-dioecy pathway.

Mathilde Dufaÿ, P. Champelovier, J Käfer, Jean-Pierre Henry, Sylvain Mousset, Gabriel A.B. Marais

Annals of Botany . 114 : 539-548

DOI: 10.1093/aob/mcu134

Journal article

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Reductive genome evolution at both ends of bacterial population size spectrum

Bérénice Batut, Carole Knibbe, Gabriel Marais, Vincent Daubin

Nature Reviews Microbiology . 12 ( 12 ) : 841-850

DOI: 10.1038/nrmicro3331

Journal article

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Dioecy is associated with higher diversification rates in flowering plants

Jos Käfer, Hugo J de Boer, Sylvain Mousset, Anneleen Kool, Mathilde Dufaÿ, Gabriel A.B. Marais

Journal of Evolutionary Biology . 27 : 1478-1490

DOI: 10.1111/jeb.12385

Journal article

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A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.

Sophia S. Ahmed, J. Mark Cock, Eugenie Pessia, Remy Luthringer, Alexandre Cormier, Marine Robuchon...

Current Biology - CB . 24 ( 17 ) : 1945-1957

DOI: 10.1016/j.cub.2014.07.042

Journal article

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Sex uncovered: the evolutionary biology of reproductive systems

T. Schwander, Gabriel Marais, D. Roze

Journal of Evolutionary Biology . 27 : 1287-91

Journal article

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Patterns of molecular evolution in dioecious and non-dioecious Silene

J. Kafer, M. Talianova, T. Bigot, E. Michu, L. Guéguen, A. Widmer...

Journal of Evolutionary Biology . 26 : 335--46

DOI: 10.1111/jeb.12052

Journal article

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The evolution of X chromosome inactivation in mammals: the demise of Ohno's hypothesis?

E. Pessia, J. Engelstadter, G. Marais

Cellular and Molecular Life Sciences . 71 : 1383--1394

DOI: 10.1007/s00018-013-1499-6

Journal article

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Simulating evolutionary scenarios to test whether they can induce reductive evolution

Bérénice Batut, Mathilde Dumond, Gabriel Marais, Guillaume Beslon, Carole Knibbe

SMBE 2012 : Society for Molecular Biology and Evolution .

Poster

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Evidence for Widespread GC-biased Gene Conversion in Eukaryotes

Eugénie Pessia, Alexandra Popa, Sylvain Mousset, Clément Rezvoy, Laurent Duret, G. Marais

Genome Biology and Evolution . 4 : 787-794

DOI: 10.1093/gbe/evs052

Journal article

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Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome

E. Pessia, T. Makino, M. Bailly-Bechet, A. Mclysaght, Gabriel Marais

Proceedings of the National Academy of Sciences of the United States of America . 109 ( 14 ) : 5346-5351

DOI: 10.1073/pnas.1116763109

Journal article

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Repeated evolution of testis-specific new genes: the case of telomere-capping genes in Drosophila.

Raphaëlle Dubruille, Gabriel A.B. Marais, Benjamin Loppin

Int J Evol Biol . 2012 : 708980

DOI: 10.1155/2012/708980

Journal article

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Rapid De Novo Evolution of X Chromosome Dosage Compensation in Silene latifolia a Plant with Young Sex Chromosomes

A. Muyle, N. Zemp, C. Deschamps, Sylvain Mousset, A. Wildmer, Gabriel Marais

PLoS Biology . 10 ( 4 ) : e1001308

DOI: 10.1371/journal.pbio.1001308

Journal article

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Structural, functional and evolutionary analysis of the unusually large stilbene synthase gene family in grapevine (Vitis vinifera)

C. Parage, R. Tavares, S. Réty, R. Baltenweck-Guyot, A. Poutaraud, L. Renault...

Plant Physiology . 160 : 1407-1419

Journal article

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Multiple Nuclear Gene Phylogenetic Analysis of the Evolution of Dioecy and Sex Chromosomes in the Genus Silene

Gabriel Marais, A. Forrest, E. Kamau, Jos Käfer, Vincent Daubin, D. Charlesworth

PLoS ONE . 6 : e21915

DOI: 10.1371/journal.pone.0021915

Journal article

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Comparative high-throughput transcriptome sequencing and development of SiESTa, the \textitSilene EST annotation database

N. Blavet, D. Charif, C. Oger-Desfeux, Gabriel Marais, A. Widmer

BMC Genomics . 12 : 1-11

DOI: 10.1186/1471-2164-12-376

Journal article

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Evolution Moléculaire

L. Duret, T. Bataillon, N. Bierne, Vincent Daubin, J. Dutheil, Christian Gautier...

Biologie évolutive . 978-2-8041-0161-9 : 114-173

Book chapter

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Specialization of a Drosophila capping protein essential for the protection of sperm telomeres.

Raphaëlle Dubruille, Guillermo A Orsi, Lætitia Delabaere, Elisabeth Cortier, Pierre Couble, Gabriel A.B. Marais...

Current Biology - CB . 20 ( 23 ) : 2090-9

DOI: 10.1016/j.cub.2010.11.013

Journal article

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Can Intra-Y Gene Conversion Oppose the Degeneration of the Human Y Chromosome? A Simulation Study

Gabriel Marais, P.R.A. Campos, I. Gordo

Genome Biology and Evolution . 2 : 347-357

Journal article

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Structure and evolution of Apetala3 a sex-linked gene in Silene latifolia

R. Cegan, Gabriel Marais, H. Kubekova, N. Blavet, A. Widmer, B. Vyskot...

BMC Plant Biology . 10 : 1-10

Journal article

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Chromosomal Redistribution of Male-Biased Genes in Mammalian Evolution with Two Bursts of Gene Gain on the X Chromosome

Y.E. Zhang, M.D. Vibranovski, P. Landback, Gabriel Marais, M. Long

PLoS Biology . 8 ( 10 ) : 1-13

DOI: 10.1371/journal.pbio.1000494

Journal article

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Specialization of a Drosophila Capping Protein Essential for the Protection of Sperm Telomeres

R. Dubruille, G.A. Orsi, L. Delabaere, E. Cortier, P. Couble, Gabriel Marais...

Current Biology - CB . 20 : 1-10

DOI: 10.1016/j.cub.2010.11.013

Journal article

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Footprints of Inversions at Present and Past Pseudoautosomal Boundaries in Human Sex Chromosomes

Claire Lemaitre, Marília D.V. Braga, Christian Gautier, M.-F. Sagot, Eric Tannier, Gabriel Marais

Genome Biology and Evolution . 1(1) : 56-66

Journal article

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