Porphyre Thibaud

The time of infection matters: seasonal interplay between host and pathogen drives epidemic dynamics

Rémi Fay, Marlène Gamelon, Eric Baubet, Thibaud Porphyre

Oikos .

DOI: 10.1111/oik.10750

2024

Article dans une revue

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Risk of further EHDV introduction in Europe

Amandine Bibard, Davide Martinetti, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

17. International Symposium on Veterinary Epidemiology and Economics .

2024

Poster

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Cleaning practices of transport vehicles by commercial and non-commercial livestock markets users in Scotland

Rebecca Allen, Lisa Boden, Ian Hutchinson, Julie Stirling, Thibaud Porphyre

Research in Veterinary Science . : 105413

DOI: 10.1016/j.rvsc.2024.105413

2024

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Factors associated with the spatiotemporal distribution of dog rabies in Tunisia

Sana Kalthoum, Samia Mzoughi, Raja Gharbi, Monia Lachtar, Bassem Bel Haj Mohamed, Haikel Hajlaoui...

PLoS Neglected Tropical Diseases . 18 ( 8 ) : e0012296

DOI: 10.1371/journal.pntd.0012296

2024

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Quantitative risk assessment for the introduction of bluetongue virus into mainland Europe by long‐distance wind dispersal of Culicoides spp.: A case study from Sardinia

Amandine Bibard, Davide Martinetti, Aymeric Giraud, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

Risk Analysis .

DOI: 10.1111/risa.14345

2024

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Cleaning Practices of Transport Vehicles by Commercial and Non-Commercial Livestock Markets Users in Scotland

Rebecca Allen, Lisa Boden, Ian Hutchinson, Julie Stirling, Thibaud Porphyre

DOI: 10.2139/ssrn.4797905

2024

Pré-publication

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Assessing the Risk of Windborne Dispersal of Culicoides Midges in Emerging Epizootic Hemorrhagic Disease Virus Outbreaks in France

Amandine Bibard, Davide Martinetti, Albert Picado, Karine Chalvet-Monfray, Thibaud Porphyre

Transboundary and emerging diseases . 2024 ( 1 ) : 5571195

DOI: 10.1155/2024/5571195

2024

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Interaction of Human Behavioral Factors Shapes the Transmission of Arboviruses by Aedes and Culex Mosquitoes

Aubane Renard, Fernanda Pérez Lombardini, Mitsuri Pacheco Zapata, Thibaud Porphyre, Ana Bento, Gerardo Suzán...

Pathogens . 12 ( 12 ) : 1421

DOI: 10.3390/pathogens12121421

2023

Article dans une revue

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Identifying target areas for risk-based surveillance and control of transboundary animal diseases: a seasonal analysis of slaughter and live-trade cattle movements in Uganda

Lina González-Gordon, Thibaud Porphyre, Adrian Muwonge, Noelina Nantima, Rose Ademun, Sylvester Ochwo...

Scientific Reports . 13 ( 1 ) : 18619

DOI: 10.1038/s41598-023-44518-4

2023

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Risk assessment of BTV-3 incursion from Sardinia by wind dispersal of Culicoides midges

Amandine Bibard, Davide Martinetti, Giraud Aymeric, Albert Picado de Puig, Karine Chalvet-Monfray, Thibaud Porphyre

Using Epidemiological Studies in Health Risk Assessments: Relevance, Reliability and Causality .

2023

Poster

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« Un lavage, c’est un lavage » : des chauffeurs bovins face aux consignes sanitaires

Clémence Beslay, Mary Bouix, Henri Fauroux, Amandine Gautier, Francesco Luposella, Jean-Marie Pillon...

Les Mondes du travail . 2023 ( 29 ) : 147-163

2023

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Risk assessment of BTV incursion in Europe from Sardinia by Culicoides spp. wind dispersal

Amandine Bibard, Davide Martinetti, Giraud Aymeric, Albert Picado de Puig, Karine Chalvet-Monfray, Thibaud Porphyre

2023 SVEPM conference .

2023

Poster

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Development and Evaluation of Two Approaches of Visual Sensitivity Analysis to Support Epidemiological Modeling

Erik Rydow, Rita Borgo, Hui Fang, Thomas Torsney-Weir, Ben Swallow, Thibaud Porphyre...

IEEE Transactions on Visualization and Computer Graphics . 29 ( 1 ) : 1255 - 1265

DOI: 10.1109/TVCG.2022.3209464

2022

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Developing digital contact tracing tailored to haulage in East Africa to support COVID-19 surveillance: a protocol

Adrian Muwonge, Christine Mbabazi Mpyangu, Allen Nsangi, Ibrahim Mugerwa, Barend Bronsvoort, Thibaud Porphyre...

BMJ Open . 12 ( 9 ) : e058457

DOI: 10.1136/bmjopen-2021-058457

2022

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A scoping review of foot‐and‐mouth disease risk, based on spatial and spatio‐temporal analysis of outbreaks in endemic settings

L González Gordon, Thibaud Porphyre, D Muhanguzi, A Muwonge, L Boden, Barend M. de C Bronsvoort

Transboundary and emerging diseases . 69 : 3198–3215

DOI: 10.1111/tbed.14769

2022

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FAIR data pipeline: provenance-driven data management for traceable scientific workflows

Sonia Natalie Mitchell, Andrew Lahiff, Nathan Cummings, Jonathan Hollocombe, Bram Boskamp, Ryan Field...

Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences . 380 ( 2233 ) : 20210300

DOI: 10.1098/rsta.2021.0300

2022

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Complex model calibration through emulation, a worked example for a stochastic epidemic model

Michael Dunne, Hossein Mohammadi, Peter Challenor, Rita Borgo, Thibaud Porphyre, Ian Vernon...

Epidemics . 39 : 100574

DOI: 10.1016/j.epidem.2022.100574

2022

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Exact Bayesian inference of epidemiological parameters from mortality data: application to African swine fever virus

David Ewing, Christopher Pooley, Kokouvi Gamado, Thibaud Porphyre, Glenn Marion

Journal of the Royal Society Interface . 19 ( 188 )

DOI: 10.1098/rsif.2022.0013

2022

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Using machine learning improves predictions of herd-level bovine tuberculosis breakdowns in Great Britain

K. Stański, S. Lycett, Thibaud Porphyre, Barend M. de C. Bronsvoort

Scientific Reports . 11 ( 1 ) : 2208

DOI: 10.1038/s41598-021-81716-4

2021

Article dans une revue

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High Prevalence and Factors Associated With the Distribution of the Integron intI1 and intI2 Genes in Scottish Cattle Herds

Cristina Fernández Rivas, Thibaud Porphyre, Margo Chase-Topping, Charles Knapp, Helen Williamson, Olivier Barraud...

Frontiers in Veterinary Science . 8 : 755833

DOI: 10.3389/fvets.2021.755833

2021

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Prevalence and Epidemiology of Non-O157 Escherichia coli Serogroups O26, O103, O111, and O145 and Shiga Toxin Gene Carriage in Scottish Cattle, 2014–2015

Deborah Hoyle, Marianne Keith, Helen Williamson, Kareen Macleod, Heather Mathie, Ian Handel...

Applied and Environmental Microbiology . 87 ( 10 ) : e03142-20

DOI: 10.1128/AEM.03142-20

2021

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Inferring livestock movement networks from archived data to support infectious disease control in developing countries

Adrian Muwonge, Paul Bessel, Thibaud Porphyre, Motta Paolo, Gustaf Rydevik, Guillaume Devailly...

DOI: 10.1101/2021.03.18.435930

2021

Pré-publication

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Uptake of Diagnostic Tests by Livestock Farmers: A Stochastic Game Theory Approach

Sibylle Mohr, Rodney Beard, Alasdair Nisbet, Stewart Burgess, Richard Reeve, Matthew Denwood...

Frontiers in Veterinary Science . 7

DOI: 10.3389/fvets.2020.00036

2020

Article dans une revue

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Multilayer network analysis unravels haulage vehicles as a hidden threat to the British swine industry

Thibaud Porphyre, Barend Bronsvoort, George Gunn, Carla Correia-Gomes

Transboundary and emerging diseases . 67 ( 3 ) : 1231-1246

DOI: 10.1111/tbed.13459

2020

Article dans une revue

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Editorial: Risk-Based Evidence for Animal Health Policy

Lisa Boden, Harriet Auty, Amy Delgado, John Grewar, Amy Hagerman, Thibaud Porphyre...

Frontiers in Veterinary Science . 7

DOI: 10.3389/fvets.2020.00595

2020

Article dans une revue

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Post‐outbreak African horse sickness surveillance: A scenario tree evaluation in South Africa’s controlled area

John Duncan Grewar, Thibaud Porphyre, Evan Sergeant, Camilla Theresa Weyer, Peter Neil Thompson

Transboundary and emerging diseases . : tbed.13566

DOI: 10.1111/tbed.13566

2020

Article dans une revue

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Endemic foot and mouth disease: pastoral in-herd disease dynamics in sub-Saharan Africa

I. Mclachlan, G. Marion, I. Mckendrick, Thibaud Porphyre, I. Handel, B. Bronsvoort

Scientific Reports . 9 ( 1 ) : 17349

DOI: 10.1038/s41598-019-53658-5

2019

Article dans une revue

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Assessing the potential of plains zebra to maintain African horse sickness in the Western Cape Province, South Africa

Thibaud Porphyre, John Grewar

PLoS ONE . 14 ( 10 ) : e0222366

DOI: 10.1371/journal.pone.0222366

2019

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Framework for Estimating Indirect Costs in Animal Health Using Time Series Analysis

Alyson Barratt, Karl Rich, Jude Eze, Thibaud Porphyre, George Gunn, Alistair Stott

Frontiers in Veterinary Science . 6

DOI: 10.3389/fvets.2019.00190

2019

Article dans une revue

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Characterizing Livestock Markets, Primary Diseases, and Key Management Practices Along the Livestock Supply Chain in Cameroon

Paolo Motta, Thibaud Porphyre, Ian Handel, Saidou Hamman, Victor Ngu Ngwa, Vincent Tanya...

Frontiers in Veterinary Science . 6

DOI: 10.3389/fvets.2019.00101

2019

Article dans une revue

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Publications

The time of infection matters: seasonal interplay between host and pathogen drives epidemic dynamics

Risk of further EHDV introduction in Europe

Cleaning practices of transport vehicles by commercial and non-commercial livestock markets users in Scotland

Factors associated with the spatiotemporal distribution of dog rabies in Tunisia

Quantitative risk assessment for the introduction of bluetongue virus into mainland Europe by long‐distance wind dispersal of Culicoides spp.: A case study from Sardinia

Cleaning Practices of Transport Vehicles by Commercial and Non-Commercial Livestock Markets Users in Scotland

Assessing the Risk of Windborne Dispersal of Culicoides Midges in Emerging Epizootic Hemorrhagic Disease Virus Outbreaks in France

Interaction of Human Behavioral Factors Shapes the Transmission of Arboviruses by Aedes and Culex Mosquitoes

Identifying target areas for risk-based surveillance and control of transboundary animal diseases: a seasonal analysis of slaughter and live-trade cattle movements in Uganda

Risk assessment of BTV-3 incursion from Sardinia by wind dispersal of Culicoides midges

« Un lavage, c’est un lavage » : des chauffeurs bovins face aux consignes sanitaires

Risk assessment of BTV incursion in Europe from Sardinia by Culicoides spp. wind dispersal

Development and Evaluation of Two Approaches of Visual Sensitivity Analysis to Support Epidemiological Modeling

Developing digital contact tracing tailored to haulage in East Africa to support COVID-19 surveillance: a protocol

A scoping review of foot‐and‐mouth disease risk, based on spatial and spatio‐temporal analysis of outbreaks in endemic settings

FAIR data pipeline: provenance-driven data management for traceable scientific workflows

Complex model calibration through emulation, a worked example for a stochastic epidemic model

Exact Bayesian inference of epidemiological parameters from mortality data: application to African swine fever virus

Using machine learning improves predictions of herd-level bovine tuberculosis breakdowns in Great Britain

High Prevalence and Factors Associated With the Distribution of the Integron intI1 and intI2 Genes in Scottish Cattle Herds

Prevalence and Epidemiology of Non-O157 Escherichia coli Serogroups O26, O103, O111, and O145 and Shiga Toxin Gene Carriage in Scottish Cattle, 2014–2015

Inferring livestock movement networks from archived data to support infectious disease control in developing countries

Uptake of Diagnostic Tests by Livestock Farmers: A Stochastic Game Theory Approach

Multilayer network analysis unravels haulage vehicles as a hidden threat to the British swine industry

Editorial: Risk-Based Evidence for Animal Health Policy

Post‐outbreak African horse sickness surveillance: A scenario tree evaluation in South Africa’s controlled area

Endemic foot and mouth disease: pastoral in-herd disease dynamics in sub-Saharan Africa

Assessing the potential of plains zebra to maintain African horse sickness in the Western Cape Province, South Africa

Framework for Estimating Indirect Costs in Animal Health Using Time Series Analysis

Characterizing Livestock Markets, Primary Diseases, and Key Management Practices Along the Livestock Supply Chain in Cameroon